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tcga cnv
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how to analyze TCGA CNV data
TCGA CNV
correlation between mRNA exprssion and CNV
updated 8.3 years ago by
spulido99
• 0 • written 9.2 years ago by
ycding
▴ 10
0
votes
4
replies
1.9k
views
Using cn.MOPs to estimate CNVs in tumors without reference normal
cn.mops
cnvtools
tcga cnv
updated 8.6 years ago by
Günter Klambauer
▴ 540 • written 8.6 years ago by
vakul.mohanty
▴ 20
27
votes
21
replies
23k
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Mapping genome regions to gene symbols
tcga cnv
gene symbol
coordinate
updated 19 months ago by
James W. MacDonald
66k • written 9.1 years ago by
NS
▴ 60
3 results • Page
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Comment: Odd behavior of Rsubread::featureCounts when setting `nonOverlap = 0`
by
isaac.vock
• 0
Thank you for looking into this and for your explanation! As a follow-up, would it be possible in future releases of featureCounts to pro…
Comment: error loading collectTRI regulon
by
silvaesilva.da
• 0
Fantastic. Thank you very much. Everything has been sorted out
Answer: DESeq2 returns results for group with just one replicate
by
James W. MacDonald
66k
There is no problem having only one replicate per group, so long as you have replicates for other groups. The degrees of freedom are based …
Answer: Limma model.matrix design with batch effect and different life stages proportion
by
Masongeorge
• 0
Thanks for this post. i found it helpful for my own issue that was occurring on the backend of this page.
Comment: error loading collectTRI regulon
by
deeenes
▴ 50
I fixed the original, Ensembl HTTP 403 error only now, [see here][1]. If you've seen it gone earlier today, only shows that this error appe…
Votes
Answer: Odd behavior of Rsubread::featureCounts when setting `nonOverlap = 0`
Answer: DESeq2 returns results for group with just one replicate
Answer: DESeq2 returns results for group with just one replicate
Comment: error loading collectTRI regulon
A: Scaling option in fastMNN
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